Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLAIKTRVKTAKGRKLSSTRWLHRHLNDQYVQKTNKDSYRSRSAYKLIEIDNKFKLLQAGQKIVDLGASPGGWSQ-VASQKGVK--VVAIDIKPVNTISGVKYIQYDINE---LETLRERFKDQKFDVILSDMAPESCGLKSLDHIRIMLLCEAALNFAKHFLNYGGKFVVKIFQGESDKDFYNELKKMFKIVKYFKPKSSRSESTEMYLVGLGFISNSFPI
1EJ0 Chain:A ((3-177))
---------------------------------------RSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP-----
General information:
TITO was launched using:
RESULT:
Template:
1EJ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105084 for 1313 contacts (-80.0/contact) +
2D Compatibility (PS) -18973 + (NN) -13153 + (LL) 3080
1D Compatibility (HY) -16400 + (ID) 3850
Total energy: -154380.0 ( -117.58 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1EJ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EJ0-query.scw
PDB file :
Tito_Scwrl_1EJ0.pdb
: