Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHQETTSQQYNFSIIKHGDISTPQGFTAGGMHIGLRAN-KKDFGWIYSSSLASSAAVYTLNQFKAAPLIVTEDTLQKSKGKLQALVVNSANANSCTGQQGIDDARQTQTWVAQQLQIPSEHVAVASTGVIGEYLPMDKIKTGTEHIKDTNF-ATPGAFNEA---ILTTDTCTKHIAVSLKIDGKTVTIGGSAKGSGMIHPNMATMLAFITTDASIESNTLHQLLKSSTDHTFNMITVDGDTSTNDMVLVMANHQVEHQILSQDHPQWETFVDAFNFVCTFLAKAIARDGEGATKLISVNVSGAKSISDARKIGKTIVSSNLVKSAIFGEDANFGRIITAIGYSG--CEIDPKCTYVQLNQIPVV--DKGMAVLFDEQAMSNTLTHEHVTIDVQLGLGNAAATAYGCDLSYDYVRINASYRT |
| 1VZ7 Chain:A ((8-390)) | ----------------------TPRGFVVHTAPVGLADDGRDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAV--ADGQARGVVVLARNANVATGLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIR---EHLKTLEWPAGEGGFDRAARAIMTTDTRPKEVRVS--VGGATLV--GIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANG------LAGEVDAGE-FEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPP---DDAL--RAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187056 for 3308 contacts (-56.5/contact) +
2D Compatibility (PS) -39778 + (NN) -12029 + (LL) 2756
1D Compatibility (HY) -23600 + (ID) 7100
Total energy: -266807.0 ( -80.66 by residue)
QMean score : 0.371
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