Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGKPLFKKGDSMNNSIFYTYLKFNLRYFIRRKFEIVKRSRLNVTTKILFLIKLIFSSLLLFISTIMLADYFSDYIDFIEYYFYASMFIYIVFIPLIPRTKLLINPMDKQLLYRSSLREVDIFNLIYASDVLKKFVGYFNLLIVGMAISLYHISPFIFNLKVFCALIYFSTISYVIQIIFINIKVISTKKLFSYHYCVFNFMMGSIVSVIGFVVSFLLVNLLIKPFLVFSTYVIKSKKTFEWYSYFQDIKNEVIIINEKVMQLLDYISPHTIFMRLNFVNISFVIITIALFIALYYFNKIGFWYRKEDIYLSSTNINFSLPISIKAITTIQLKHWISNKEEVNLHKPFFYISYSIWFFLGCLIYFSQMAYNQLANAVIFILILNTITRDSFSAGTDFFTKSLRFDSDRKSIGLYRMSNTDFKQIYDSKLSLIRFIGFKETILAIILLAIFLNQDIYLYIIGFEIIIINTVIIPNLSLLPSYLSPHFNHQHYSELESFEEQIFLEDTVFDKVKNFLSSSYFLILFVGYLSQRNYIDIMIFIIIFNILALILVSLFIRFSKQKITKSWRKRDLYL |
2IGR Chain:A ((4-13)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFKKIEKKWK------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 1952 for 30 contacts (65.1/contact) +
2D Compatibility (PS) -1061 + (NN) -243 + (LL) 52304
1D Compatibility (HY) -800 + (ID) 200
Total energy: 51952.0 ( 1731.73 by residue)
QMean score : 0.342
|
|
|