Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVELPYIEKRSQDVGITINAASNVSDVGKAFPGQPSIAHDSDIEGLKRLATAMKKNGAKALVQIHHGGAQALPELIPDGDVVAPSPISLKSFGQKQEH----SAREMTNEEIEQAIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWA----NQYKFPVAVIEEVLKAKEAYGNKDFIVGYRLSPE---EAESPGITMEITEELVNKISHMPIDYIHVSMMDTHATTREGKYAGQERLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIKDGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK |
| 4B5N Chain:A ((11-348)) | -----ENLFDTYKLNDTITLKNRILMAPLTRCMADANLVPTDDMVAYYARRAE-AGLIISEATIIRPDAQGYPNTPGIFTQAQIAGWRKVTDAVHANGGKIFVQLWHTGRVAHPHFFGGGDVLAPSAQKIEGSVPRMRELTYVTPKAVTVEDIQGLVRDYAKAAENVIEAGFDGVEIHGANGYLIDQFLHHDSNRRTDEYGGTPVNMSRFALEVVDAII-ARIGHDR----TGLRISPGAYFNMASDSRDRVVFDYLLPELEKRDLAFVHIGIFD---DSIEFDYLGGTASSYVRAHYG--KTLVGVGS-YSAETASKAIAEDKFDLIAIGRPFIANPDYVAKVRN--SEELVAYSD----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156710 for 2928 contacts (-53.5/contact) +
2D Compatibility (PS) -35585 + (NN) -19564 + (LL) 1872
1D Compatibility (HY) -24000 + (ID) 5000
Total energy: -238987.0 ( -81.62 by residue)
QMean score : 0.525
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