Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPILLTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMISKNPDQPIDYNKATLNVFEALTRYSLFEDK |
| 4GME Chain:A ((148-239)) | ----------------------------------------NGETIEDTIAEAVKYKAMGYKAIRLQTG-VPGLASTYGVSKDKMF---YEPADNDLPTENIWSTAKYLNSVPKLFERAREV--LGWDVHLLHDVHHRL--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5110 for 572 contacts (8.9/contact) +
2D Compatibility (PS) -9595 + (NN) -4788 + (LL) 6300
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -7723.0 ( -13.50 by residue)
QMean score : 0.194
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