Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSRIRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKIKESSK
3W02 Chain:A ((6-230))
MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSKIRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKI-----
General information:
TITO was launched using:
RESULT:
Template:
3W02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175854 for 1901 contacts (-92.5/contact) +
2D Compatibility (PS) -24874 + (NN) -13135 + (LL) 176
1D Compatibility (HY) -35200 + (ID) 11200
Total energy: -260087.0 ( -136.82 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_3W02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W02-query.scw
PDB file :
Tito_Scwrl_3W02.pdb
: