Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYESFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSALLTAVTNNIAFSQKERH
4LLH Chain:A ((423-521))
------------------------------------------------------------------IMGIIAMILLGTF--FITSADSASTVMGTMSQHGQLEANKWVTAAWGVATAAIGLTLLLSGGDNALSNLQNVTIVAATP-FLFVVIGLMF---ALVKDLSNDVIYLEYREQ
General information:
TITO was launched using:
RESULT:
Template:
4LLH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24372 for 480 contacts (-50.8/contact) +
2D Compatibility (PS) -9943 + (NN) -1100 + (LL) 8052
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -35963.0 ( -74.92 by residue)
QMean score : 0.094
(partial model without unconserved sides chains):
PDB file :
Tito_4LLH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LLH-query.scw
PDB file :
Tito_Scwrl_4LLH.pdb
: