Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIFGELGSLGHLFKKTQELE--ILHGYLQDVMQKGSEANQRVLNLAINTEFQVPLEHGIFSIEQSYCLEHAK----EGEKGFFESHRQYVDFQLIIKGVEGAKVADINRAVIKTPYDEKRDLIVYEPVSEASFLHLDAGMLAIFLENDAHALRFYGESFEKYREEPIFKAVVKMPKGLIKLKL
2IYO Chain:A ((373-453))
------LQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYRSENLPANLIQAQRDYFGAHTYERTDKAGIFHYDWYT--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IYO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11802 for 354 contacts (-33.3/contact) +
2D Compatibility (PS) -7366 + (NN) 1083 + (LL) 7036
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -16899.0 ( -47.74 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_2IYO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IYO-query.scw
PDB file :
Tito_Scwrl_2IYO.pdb
: