Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIGVYIISLKESQRRLDTEKLVLESNEKFKGRCVFQIFDAISPKHQDFEKLLQELYNAQSLLQSDWYHSYVGAGLTLPELGCYLSHYLLWKECVKLDQPVVILEDDVTLESHFMQALEDCLKSPFDFVRLYGCYWYYHETKFHVLPKEFVFPPFDHSFKNNPILEKFKKFFDVSRFLNLSTHKVIHYILKKIQKSYYATHEK---------EAFFLEHFYLTSVYVASTAGYYLTPKGAKTFIEATESFKIIEPVDMFMDNSAYHDVANLTYVPCPVSLSEHSLDSTIQKPQKKSLKSYPLPPQKSTFKNLFYYSLNAKKRLNAFQQYSKQYAPLKTPKEV |
3IP3 Chain:A ((189-245)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IHWITGKKFLSVYATHSRLHNSGHGELETTALCHFTLENEVFASLSIDYLRPQGAPTHDDDRMRIVGTRGIVEVINERVFLTDEKGHREVPLVEKGQIFEDFLREIRGQGKCMVTPEDSILTTEIALKARLSADTGQIVLI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12491 for 229 contacts (-54.5/contact) +
2D Compatibility (PS) -4919 + (NN) 798 + (LL) 15500
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -4212.0 ( -18.39 by residue)
QMean score : 0.040
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