Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVVVAAKRSAVGSFLGSLKNVGARQMGVSVLKDALNASSLKPSDVDSVILGNVLGAGLGQNIARQIQLDAGIPNDRNAFSVNMVCGSSMKAIQLAHDSIVLGCDEVVVCGGVENMSAAPYLSFDMREGKRMGNANMIDSMIHDGLWDAFNDYHMGITADNVAQAYHISREDQDAFALQSQLKARAAINAGKFQEEITPIEIANKKGVVVFKEDEYPR-DTTLESLAKLKPAFKKDGSVTAGNSSGINDGASIIILCSAKKAQKLGLKTMATIKGFGLGGCSPDIMGICPSIAIKNNLKNIKMNLNDINLFELNEAFAAQSIAVLKELELNPNIVNVNGGAIAIGHPIGASGARILVTLLHEMKRSGHGVGCASLCVGGGQGLSVVVEQK |
| 4N45 Chain:A ((1-391)) | MKEVVIASAVRTAIGSYGKSLKDVPAVDLGATAIKEAVKKAGIKPEDVNEVILGNVLQAGLGQNPARQASFKAGLPVEIPAMTINKVCGSGLRTVSLAAQIIKAGDADVIIAGGMENMSRAPYLANNARWGYRMGNAKFVDEMITDGLWDAFNDYHMGITAENIAERWNISREEQDEFALASQKKAEEAIKSGQFKDEIVPVVIKGRKGETVVDTDEHPRFGSTIEGLAKLKPAFKKDGTVTAGNASGLNDCAAVLVIMSAEKAKELGVKPLAKIVSYGSAGVDPAIMGYGPFYATKAAIEKAGWTVDELDLIESNEAFAAQSLAVAKDLKFDMNKVNVNGGAIALGHPIGASGARILVTLVHAMQKRDAKKGLATLSIGGGQGTAILLEKC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220745 for 3845 contacts (-57.4/contact) +
2D Compatibility (PS) -42575 + (NN) -17703 + (LL) 0
1D Compatibility (HY) -32400 + (ID) 10450
Total energy: -323873.0 ( -84.23 by residue)
QMean score : 0.500
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