Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKRKRPQSGKIDRVDC---------LEKLGKEN-TTFLSSIAMGSIGQLAIPIP-----GVG-VLIGGFVGGVMSKTFYDVSLTIFKEAKLARQRRIEIEKECRESIRQLEMYQNQFNEVFERYFHGTIKFFNESFDELERALCAGDADLAIAVNNKIQEGMGQELLFDNKQECWEFITSRKEGWNFITSRGKTEI |
1EQU Chain:A ((72-154)) | VAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14796 for 304 contacts (-48.7/contact) +
2D Compatibility (PS) -7102 + (NN) -648 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -29796.0 ( -98.01 by residue)
QMean score : 0.048
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