Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDFLEDYKKSVLERKSEGIPPLPLNAKQVEAVVEILMKDPTNAAFAKELLIHRVSPGVDEGAKVKAEFLAQLSQKKLECPHISALEATTLLGTMLGGYNVEPLIVGLESQDKNIAKESAKALKTTLLVYGSFDKIAAMSKTNALAKEVLESWANAEWFLNKEPLNECIEACVFKIDGETNTDDLSPASDAFTRSDIPLHAKAMLKNRIENYEQRIEAIKTKGVPVAYVGDVVGTGSSRKSATNSIMWHFGKDIPFVPNKRSGGIVIGGVIAPIFFATCEDSGALPIVADVKDLKEGDIIKIYPYKGEITLNDKVVSTFKLEPETLLDEVRASGRIPLIIGRGLTNKARKFLGLGESEAFKKPSAPKSDAKGYTLAQKIVGHACGVKGILPGAYCEPKVTTVGSQDTTGAMTRDEVKELASLKFDAPFVLQSFCHTAAYPKPSDVSLHATLPGFITQRGGVALHPG-DGVIHTWL-NRMGLPDTLGTGGDSHT--RFPLGISFPAGSGL--VAFAAVTGTMPLNMPESVLVRFKGEMNPGITLRDLVNAIPYYAIKKG--LLTVEKKGKINVFNGRILEIEGLPDIKMEQAFELSDASAERSAAACVVRLNKEPMIEYLKSNIKLIDEMIASGYEDKETLKKRRDAMQAWVDKPVLLEPDSNAQYAAVIEIDVAEITEPILACPNDPDDVATLSEVLADTTGKRPHAIDEVFIGSCMT-NIGHFRAFGEIVKNAPPSQ-ARLWVVPPSKMDEQELINEGYYAIFGAAGARTEVPGCSLCMG-NQARVRDNAVVFSTSTRNFDNRMGR-GAKVYLGSAELGAACALLGRIPTKEEYMNLVSEKLESQKDKIYRYMNFNLMENFRL |
| 4KP2 Chain:A ((23-439)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLVEKILSKKVGYE-VCAGDSIEVEVDLAMTHDGTTPLAYKALKEMSDSVWNPDKIVVAFDHNVPPNTVKAAEMQKLALEFVKRFGIKNFHKGGEGICHQILAENYVLPNMFVAGGDSHTCTHGAFG-AFATGFGATDMAYIYATGETWIKVPKTIRVDIVGK-NENVSAKDIVLRVCKEIGRRGATYMAIEYGGEV------------VKNMDMDGRLTLCNMAIEMGGKTGVIEAD-EITYDYLKKERGLSDEDIAK-------LKKER----------ITVNRDE-ANYYKEIEIDITDMEEQV-AVPHHPDNVKPISDV-------EGTEINQVFIGSCTNGRLSDLREAAKYLKGREVHKDVKLIVIPASKKVFLQALKEGIIDIFVKAGAMICTPGCGPCLGAHQGVLAEGEICLSTTNRNFKGRMGHINSYIYLASPKIAAISAVKGYITNK-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189659 for 3696 contacts (-51.3/contact) +
2D Compatibility (PS) -43716 + (NN) -18570 + (LL) 29148
1D Compatibility (HY) -27200 + (ID) 6000
Total energy: -255997.0 ( -69.26 by residue)
QMean score : 0.369
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