Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLTHLNEENQPKMVDIGDKETTERIALASGRISMNKEAYDAIINHGVKKGPVLQTAIIAGIMAAKKTSELIPMCHPIMLNGVDIDILEEKETCSFKLYARVKTQAKTGVEMEALMSVSIGLLTIYDMVKVIDKSMTISGVMLEHKSGGKSGDYNAKK
2IDE Chain:A ((8-154))
--------DGRPRMVDVTEKPETFRTATAEAFVELTEEALSALEKGGVGKGDPLVVAQLAGILAAKKTADLIPLCHPLPLTGVEVRVELLKAEKRVRIEATVKTKAETGVEMEAMTACAVAALTVYDMLKAASKGLVISQVRLLHKAGGKSGEWRR--
General information:
TITO was launched using:
RESULT:
Template:
2IDE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85205 for 1162 contacts (-73.3/contact) +
2D Compatibility (PS) -15555 + (NN) -1866 + (LL) 748
1D Compatibility (HY) -10000 + (ID) 3300
Total energy: -115178.0 ( -99.12 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_2IDE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IDE-query.scw
PDB file :
Tito_Scwrl_2IDE.pdb
: