Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGSLAIVLGSLLASGTFYTALADGMPMKQQHNNMGESVELHFHYPIKGKQEPKNNHLVVLIDPKIEANKVIPENYQKEFEKSLFLQLSNFLERKGYSVSQFKDVSEIPQDIKEKALLVLRMDGNVAILEDIVEESDALSEEK-VIDMSSGYLNLNFVEPKSEDIIHSFGIDVSKIKAVIERVELRRTNSGGFVPKTFVHRIKETDHDRAIKKIMNQAYHKVMAHITKELSKKHMERYEKVSSEMKKRK |
1J5Y Chain:A ((82-139)) | --------------------------------------------------------------------------------------------------GVSRLVAVKHAPEEIKEELLCVVRNGGRIV---DVIVEHPVYGEIRGIIDVSSEEEVLKFVNLMEMAKTEPLLTLSGGVHLHTIEAPDEETMERIMRELKKKGFLIEE-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6797 for 281 contacts (-24.2/contact) +
2D Compatibility (PS) -6106 + (NN) -1290 + (LL) 9912
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -10931.0 ( -38.90 by residue)
QMean score : 0.284
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