Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLSQALNKAKKELSPKGFRGGLESEILLGFVLQKERVFLHTHEHLELSHEEETRFFELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALNIISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPKALEVALKNIERFCLKERVFLKQTRLW----DHMPTIEMLVSNPPYIARNYPLEKSVLKEPHEALFGGVKGDEILKEIVFLAAKLKIPFLVCEMGYDQLKSLKECLEFCGYDAEFYKDLSGFDRGFVGVLKSFLR |
1NV9 Chain:A ((48-272)) | --------------------------------IRKEDLFL---KDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVA-KFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSA------LFEPPEALFGGEDGLDFYREF-FGRYDTSGKIVLMEIGEDQVEELKKIVS----DTVFLKDSAGKYRFLLLNRRSS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111284 for 1631 contacts (-68.2/contact) +
2D Compatibility (PS) -22588 + (NN) -5678 + (LL) 3100
1D Compatibility (HY) -21600 + (ID) 4500
Total energy: -162550.0 ( -99.66 by residue)
QMean score : 0.449
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