Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMNEIIAVANQKGGVGKTTTAVNLAASLAAHEKKILLIDFDPQANATSSLGFRRDKIDYDIYHVLIGR------KQISQVILKTQMPFLDLVPSNLGLAGFEKTFYDS-QDENKRGELMLKNALGSVVKLYDYIIIDSPPALGPLTINSLSAAHSVIIPIQCEFFALEGTKLLLNTIRMLQKSTNPKLKIRGFLPTMHVPQLNLTKGVLAELFKYFDSEFFRDSATGEYIMIPKSVKLAESPSFGKPILLYDIKSNGSIAYQKLAQSILQG |
2BEK Chain:A ((9-243)) | -----IALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLAPQGNATSGLGVRAER---GVYHLLQGEPLEGLVHPVDGFHLLPATP--DLVGATVELAGAPTALREALRDEG-----------------YDLVLLDAPPSLSPLTLNALAAAEGVVVPVQAEYYALEGVAGLLATLEEVRAGLNPRLRLLGILVTMYDGRTLLAQQVEAQLRAHFGEKVF-------WTVIPRNVRLAEAPSFGKTIAQHAPTSPGAHAYRRLAEEVMAR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2BEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -121475 for 2020 contacts (-60.1/contact) +
2D Compatibility (PS) -23869 + (NN) -5854 + (LL) 2680
1D Compatibility (HY) -19200 + (ID) 5150
Total energy: -172868.0 ( -85.58 by residue)
QMean score : 0.446
|
|
|