Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTEILTIMLVVSVLMGLVGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKRQKN
3WU2 Chain:Y ((4-29))
------AQLTMIAMIGIAGPMIIFLLAVRRGNLPIFTVRWVAVHTLAVPTIFFLGAIAAMQFI
General information:
TITO was launched using:
RESULT:
Template:
3WU2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8186 for 160 contacts (-51.2/contact) +
2D Compatibility (PS) -4737 + (NN) -5370 + (LL) 664
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -20329.0 ( -127.06 by residue)
QMean score : 0.149
(partial model without unconserved sides chains):
PDB file :
Tito_3WU2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WU2-query.scw
PDB file :
Tito_Scwrl_3WU2.pdb
: