Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKIRLKLKAYDHRVLDRSVVAIVEAVKRSGSEIRGPIPLPTKNKRYTVLRSPHVNKDSREQFEIRVYSRLIDIISATPETVDSLMKLDLAPEVDVEVTSMETK
3W1Y Chain:C ((5-101))
--RIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLI---------DQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG---
General information:
TITO was launched using:
RESULT:
Template:
3W1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42617 for 577 contacts (-73.9/contact) +
2D Compatibility (PS) -9439 + (NN) -3937 + (LL) 644
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -66949.0 ( -116.03 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_3W1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W1Y-query.scw
PDB file :
Tito_Scwrl_3W1Y.pdb
: