Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNVFFKQQKFVIKKRFNDFNGFDIEENEVLWFELINPTPNELATLSQEYAIHYNTDHSQRVSSVTKYWEDSSSVTINAFFTNQDENETFHMEMATFILSNNILFTIYYGTLEIFDSIQKKVLASP----KKFEDG--FDILTKIFEVYFEKGVECLEWINKQTSLLRKNIIFKETSTHDDILVRLSNLQEFNVALRDSFFDKRRIITALLRSNK--VDSDTKNNLNIILTDFSSLVESTTVNLNSLDNIQNLFASQVNVEQNKIIKLFTVATMAMMPPTLIGTIYGMNFKFMPELEWQYGYLFALIVMAISTILPVIYFKKKGWL |
2BBJ Chain:A ((125-349)) | --------------------------------------------------------------------------------------------EQVSLILTKNCVLMFQEKIGDVFDPVRERIRYNRGIIRKKRADYLLYSLIDALVDDYFV----LLEKIDDEIDVLEEEVLER---PEKETVQRTHQLKRNLVELRKTIWPLREVLSSLYRDVPPLIEKETVPYFRDVYDHTIQIADTVETFRDIVSGLLDVYLSSVSNKTNEVMKVLTIIATIFMPLTFIAGIYGMNF-------WKWGYPVVLAVMGVIAVIMVVYFKKKK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2BBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -67998 for 1180 contacts (-57.6/contact) +
2D Compatibility (PS) -22138 + (NN) -7190 + (LL) 7844
1D Compatibility (HY) -20000 + (ID) 2550
Total energy: -112032.0 ( -94.94 by residue)
QMean score : 0.213
|
|
|