Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTLKGKYNEAKVFTDNV------DDNTIGQIITLCNQPFAKDSKIRIMPDTHGGKGCVIGTTMTIQDK---IVPNLVGVDIGCGLYVVK--LKPGKLKMDFDKLDKVIRERVPSGS------KTHDKPVDEFDLEGIVAPIH--HGWV----------------------------ARSIGTLGGGNHFIEVNQGSDGIY----------------LVIHSGSRVLGKEIAEYHQEVAYKRLDILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYDLSYVTGVDLKNYLNDMEIAQKFAARNRYVMAQIILKAMK--------WDKAVVSAFDCVHNYIDIEHNML----------RKGATSA-------------QLGEQIIVPLNMREGS-ILATGKGNADWNY-SAPHGAGRMLSRSKAKAQISLESYQAAM--KDVWTTSVSKKTI-DEAPKAYKSAKQLLADVEDTMEIQEIIKPLYNFKA |
| 1UC2 Chain:A ((26-451)) | ----------GRVYADEVLLEKMKNDRTLEQATNVAMLPGIYKYSI-VMPDGHQGYGFPIGGVAAFDVKEGVISPGGIGYDINCGVRLIRTNLTEKEVRPRIKQLVDTLFKNVPSGVGSQGRIKLHWTQIDDVLVDGAKWAVDNGYGWERDLERLEEGGRMEGADPEAVSQRAKQRGAPQLGSLGSGNHFLEV-QVVDKIFDPEVAKAYGLFEGQVVVMVHTGSRGLGHQVASDYLRIMERAIRKYRIPWP--------------------DRELVSVPFQSE-----EGQRYFSAMKAAANFAWANRQMITHWVRESFQEVFKQDPEGDLGMDIVYDVAHNIGKVEEHEVDGKRVKVIVHRKGATRAFPPGHEAVPRLYRDVGQPVLIPGSMGTASYILAGTEGAMKETFGSTCHGAGRVLSRKAATRQYRGDRIRQELLNRGIYVRAASMRVVAEEAPGAY---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82575 for 2696 contacts (-30.6/contact) +
2D Compatibility (PS) -35957 + (NN) -10762 + (LL) 4672
1D Compatibility (HY) -19600 + (ID) 5150
Total energy: -149372.0 ( -55.41 by residue)
QMean score : 0.442
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