Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVGEVLKDMQIDAVYTSTSKRTQDTAAYILGDREIEIQPLEELKEMGFGTWEGIRVTEIDEKHPEERAKILHSPETYKAEVNGGETYYELAERLLEGVEKIIADNPNGNILVVSHGMSLTLLLYLLQGGTIEDHRKEAPRILNTSISIVEYQNGEFSLKKINEIGHLDLK
1H2F Chain:A ((3-202))
------TLYLTRHGETKWNVERRMQGWQDSPLTEKGRQDAMRLGKRLEAVELAAIYTSTSGRALETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQ--RGERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPL-DHLWSPPYMYGTSVTIIEVDGGTFHVAVEGDVSHIE--
General information:
TITO was launched using:
RESULT:
Template:
1H2F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72694 for 1636 contacts (-44.4/contact) +
2D Compatibility (PS) -21690 + (NN) -7418 + (LL) 984
1D Compatibility (HY) -16000 + (ID) 3400
Total energy: -120218.0 ( -73.48 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1H2F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H2F-query.scw
PDB file :
Tito_Scwrl_1H2F.pdb
: