Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VNNPKPCEWKSNELSRGYIADYKAFNFVDGEGVRCSLYVSGCPFHCEGCYNKAAQSFKYGKPYTKELEDDILKDI------GHESVQGLTLLGGEPFLNTATCLSIVKRIRATYGETKDIWSWTGYTWDEMMQETADKLELLSLIDVLVDGRFEQKLFDPNLAFRGSSNQRIIDVQKSLAAGEVVLYEL |
3CB8 Chain:A ((4-84)) | ----------------GRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVE---DLMKEVVTYRHFMNASGGGVTASGGEAILQA----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8582 for 499 contacts (-17.2/contact) +
2D Compatibility (PS) -7889 + (NN) -3334 + (LL) 7912
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -17143.0 ( -34.35 by residue)
QMean score : 0.264
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