Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAGPHQQIAEEVQKLAK-KDGLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDKGYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKLKDGVEEKATKKDIAENPLDLEIVELEASQIPAQLD--EVAAAAINTNFAMGAGLSINKDAIYHEPTKDNPYPNVFVVRSANKDDEVVKTLEKYYHSDEVKAFIEKEFNGSVVPAF
4YAH Chain:X ((29-271))--------------------------------DPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVE-DKESPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW


General information:
TITO was launched using:
RESULT:

Template: 4YAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46152 for 2074 contacts (-22.3/contact) +
2D Compatibility (PS) -25784 + (NN) -7625 + (LL) 1544
1D Compatibility (HY) -16400 + (ID) 5750
Total energy: -100167.0 ( -48.30 by residue)
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_4YAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YAH-query.scw
PDB file : Tito_Scwrl_4YAH.pdb: