Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFLKKYGFYFLLLGVLSDFLTPYILGIFYPELNQMTRVMSVFGDVTSPVRGAFLVWSVVSGVFFVLALPAIYQSVVKTSRTLAILLASAIGLYGIGDCIFTGLFSIDTEQASWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKTGDKTRSNIYLVLLIVSLLSAGVYGLARIPAVNDLPVL--DKIGFCQRISFFFNYLPIVVFGIDRIRKP |
1WMP Chain:A ((588-623)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5370 for 100 contacts (-53.7/contact) +
2D Compatibility (PS) -3222 + (NN) 503 + (LL) 13928
1D Compatibility (HY) -3200 + (ID) 650
Total energy: 1989.0 ( 19.89 by residue)
QMean score : 0.068
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