Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKHNFTEDDFVYGESWGLVHRGVLEDKEVERMKALRDKVVGK-----KGVAQTTLKPIGSVRIDGEVYEARLKTGYLEVGKPIIAVGIDFGYVLVNEDIQEGEK
3G06 Chain:A ((700-744))
---------------WGPLHR-VLERKAPERVNALREKQISDYEETYRMLSDTELRPSGLV-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3G06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -436 for 165 contacts (-2.6/contact) +
2D Compatibility (PS) -4219 + (NN) -3317 + (LL) 3400
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -7922.0 ( -48.01 by residue)
QMean score : 0.229
(partial model without unconserved sides chains):
PDB file :
Tito_3G06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G06-query.scw
PDB file :
Tito_Scwrl_3G06.pdb
: