Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPIFAVGDVHGEITLLDELLENWD-------------------KERERLLFVGDLIDRGENPAAVLRRVKALADQTGAIVLKGNHEQMLLDFLENPSGKMHYYLSQGGMETIQSLIADSLDKKMTPEGLAKRVKEEASELIDFIRKLPLYY--EEGKYVFVHAGVDLTKKDWH---------------DTEERDFFWIREPFLFGQNKTGKVF-IFGHTP-VQNLHIDESSGIWVSEDKTRLDIDGGAVFGGELHGVVVEEKVITKSFSVKK |
4J6O Chain:A ((13-250)) | --PFDIIGDIHGCYDELKMLLEKLGYLIEEVEGGVGSGKYRVTHPEGRKVLFLGDLVDRGPKITEVLKLVMGMVKSGIALCVPGNHDVKLLRKLNG--------------RDVQ--ITHGLDR--TLEQLAKEPQEFIEEVKAFIDGLVSHYVLDDGKLVVAHAGM---KEEFQGRGSGKVREFALYGETTGETDEYGLPVRYDWASDYRGKALVVYGHTPQAEVLKVNNT-----------INIDTGCVFGGKLTAYRYPEREIVDVKALK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85033 for 1563 contacts (-54.4/contact) +
2D Compatibility (PS) -21712 + (NN) -9704 + (LL) 1768
1D Compatibility (HY) -15600 + (ID) 3550
Total energy: -133831.0 ( -85.62 by residue)
QMean score : 0.463
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