Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGKHLVEKMEIFKGNSKREIHKKIQLVTNEPYKITDERVTKLGIFKKQYEVTAVIMSEVAIADGRMDFQETFQKSVVKTRPKTDDLLKKEKLLEMLAAGAELAQSTPLLEERKTQEEELSSMRLELAALNRELAVKMREEREQNSDFVKFLKGRGISDTYVADFMQAGRKQFKQVETAHLDDITDWFVPYLSGKLAVEDSFDLSGHRIISLIGQTGVGKTTTLVKLGW-QLLKQNRTVGFITTDTFRSGAVEQFQGYADKLDVELIVATSPAELEEAVQYMTYVNCVDHILIDTVGRNYLAEESVSEISAYTDVVHPDLTCFTFSSGMKSADVMTILPKLAEIPIDGFIITKMDETTRIGDLYTVMQETNLPVLYMTDGQNITENIFRPKSRWLAERFVGTDRRQVVE |
2PX3 Chain:A ((106-282)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYIVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTY--AAVEQLKTYAELLQAPLEVCYTKEEFQQAKELFSEY---DHVFVDTAGRNFKDPQYIDELKETIPFESSIQSFLVLSATAKYEDMKHIVKRFSSVPVNQYIFTKIDETTSLGSVFNILAESKIGVGFMTNGQNVPEDI---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129107 for 1377 contacts (-93.8/contact) +
2D Compatibility (PS) -18406 + (NN) -4933 + (LL) 18896
1D Compatibility (HY) -15200 + (ID) 3050
Total energy: -151800.0 ( -110.24 by residue)
QMean score : 0.575
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