Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEPLVSVIIPVYNVEKYVKRCLDSVLEQTYHNLEVIVVNDGATDNSAKVIKSISDN--RIRYFEKENGGQATARNFGLDVATGDYIVMVDSDDYISKNLVETCLDTVQKT-NADLVLFTSYNVNQEGKMQYIKRDKGIKVLDAGPTPWNKFYQADLWKGSRFPVGYWYEDLGIIPVVTLKAKNPVKIQDALYYYITDRADSQSNIQQVDHFLDVVIMLENVETELKKLGIYEESKDQLAYLYIEHLIYRLVLRKAIYITNKQERKKLIKKISTIIQEKFPNWGSYPYQAGGKLTATLKKKALWLYLHHLYLLGDLVWKYPFSIRSKQTGF |
| 2Z87 Chain:A ((374-504)) | --PLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93125 for 901 contacts (-103.4/contact) +
2D Compatibility (PS) -14161 + (NN) -8511 + (LL) 15812
1D Compatibility (HY) -12000 + (ID) 2400
Total energy: -114385.0 ( -126.95 by residue)
QMean score : 0.535
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