Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLSKGLENVYVAETSISSIIDDM--LTYVGYGIDDLMENNASFEEVIYLLWHLRLPNKDEFKKFKREIQENMAVSETIITSLRMQNHQKLHPMSVLRTTVSMLGVFD-TEAELDDGEAVYRKGLRLQAKMPTIVAAFSRIRRGLDPIPPREDLNMAANFLYMITGEEADELSVEAMNKALVLHADHEFNASTFTARVCVATLSDVYSGVTAAIGALKGPLHGGANERVFDMLEEIDQAGDVRNYIQEKIDTKQKIMGFGHRVYRGGDPRAQHLREMSRKLTAEKGEEKWFDISLQVEE---SVWELKHLKPNVDFYSASVYHALGIDRDLFTLVFSVSRVSGWLAHIFE-QYRDNRLIRPRAIYVGPENRSYLPVEERI
1IOM Chain:A ((3-376))--VARGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKS-SFEETTFLLLHGRLPRRQELEEFSAALARRRALPAHLLESFK-RYPVSAHPMSFLRTAVSEFGMLDPTEGDISR-EALYEKGLDLIAKFATIVAANKRLKEGKEPIPPREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGELDVPYVPLEAR-


General information:
TITO was launched using:
RESULT:

Template: 1IOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173128 for 3027 contacts (-57.2/contact) +
2D Compatibility (PS) -38668 + (NN) -9222 + (LL) 644
1D Compatibility (HY) -32000 + (ID) 8500
Total energy: -260874.0 ( -86.18 by residue)
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_1IOM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IOM-query.scw
PDB file : Tito_Scwrl_1IOM.pdb: