Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFLHTADLHLGKIVSGVSMLAEQEYILTQITQIAEEEQVDALILAGDLYDRAVPPADAVKVLNDILVKWNVELGIPIFAISGNHDSAERL-------AFGSQWYESSKLYMKGKCTSQFDGIPFMDAEVWLVPYHEPA-IIRQAFADNSIRSFEDAMQAVTKQIRSKW-DTSKAQ-------ILVGHAFVSGGIPSDSERQLAIGNVDRVSTDCFDGFTYTALGHLHHPHAI-RHPSIFYSGSPLKYSFSEANDHKSVRIVELEGKELISVTERFLTPKHDMRIISGTLAELTENLVENPDDFFQVNLMDEGALIDPMGKLRQFYPNILHLERKKQTLKETQDSFEEIMKKDDLELFGQFFEHVNGTELTETQKQKLADVFEQARKEDAE |
| 4M0V Chain:A ((15-312)) | MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQ-QTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAP-QILPRRDGTP--GAVLCPIPFLRPRDIITSQ------EKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQL---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132277 for 2186 contacts (-60.5/contact) +
2D Compatibility (PS) -28654 + (NN) -5453 + (LL) 7540
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -179144.0 ( -81.95 by residue)
QMean score : 0.404
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