Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCTDVLVNRVTASLFEKYHSPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILTEFNGEVPKTHAELESLPGVGRKTANVVLSVGFGVPAIAVDTHVERISKRLGICRWKDSVVEVEETLKRKLPKELWSDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQAKVRGFDG
1ORP Chain:A ((4-216))
MLTKQQIRYCLDEMAKMFPDAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGVGRKTANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDDSVLEVEKTLMKIIPKEEWSITHHRMIFFGRYHCKAQSPQCPSCPLLHLCREGKKRMR------
General information:
TITO was launched using:
RESULT:
Template:
1ORP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145054 for 1716 contacts (-84.5/contact) +
2D Compatibility (PS) -22567 + (NN) -12756 + (LL) 4
1D Compatibility (HY) -27600 + (ID) 7300
Total energy: -215273.0 ( -125.45 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_1ORP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ORP-query.scw
PDB file :
Tito_Scwrl_1ORP.pdb
: