Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKVVIIGGGIVGASAAYLLSKENVQVTLIDSDE-AGQATRAAAGIICPWLSKRRNKYWYELAKNSAAFYKELAETLEGDTGRDSGYKQVGVLALRQTEEKLAELFNLARERRLDAEVMGEVAKLSEAETKQRFPLVKSG-FGSVYVSGAARVNGGLFCETLLYAAKENGVKI--KAGRAHFSSDGEVVI------DGEKEHYDKLILATGAWLKDLLQDAGFQTDVLAQKGQLLELNFSEFQTDDWPV--ILPPSAKSIVPFDNGKIIVGATHEKAAGFNTEPTAEGKAEILTEVSQFMEGDLASKVAHVSVGTRPYTPDFTPIIGQLPGFESVFLANGLGASGLTTGPYVGRILADLALGNASDFVLENYEPSKYISR |
| 1RYI Chain:A ((34-360)) | -----------------YYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQL------RQMDD--LDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANH---VVVASGVWSGMFFKQLGLNNAFLPVKGECLSV-----WNDDIPLTKTLYHDHCYIVPRKSGRLVVGAT-MKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119384 for 2521 contacts (-47.4/contact) +
2D Compatibility (PS) -33984 + (NN) -10101 + (LL) 3324
1D Compatibility (HY) -18800 + (ID) 4450
Total energy: -183395.0 ( -72.75 by residue)
QMean score : 0.473
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