Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFYKTKQSLDQLVQNGSTPGISYQIKTNHLEENNIMGLKSVFPEAEILPRTTENIYDIASLTKVIATTTRILQLIEQQRFQLNDPIQVYLPDFQYNN-VTILHLLTHSSGL--------AQNIPNF-SMNNR----EDVMRYVYATPQINTPGTVVTYADANFLLLGYLISKLDG-NYEKAIQNNILEPLIMTNTSFHPVNKKQVIPTEL-------DQTRGLIQGEVHDFKAWTAKSGTGHAGLFSTLSDLSKFRDALMLQLGAPILSEKTWQLMQINHTPGLNRSRGLGWDLR------GESVLYHTG-----FTGTFMVLDLKRQASLIVLSNRVHPSRANPNFVDKRDSIVDTFIEEVSNTKEV |
| 1SDE Chain:A ((53-324)) | --------------------------------------------------TTTDRFRVGSVTKSFSAVV-LLQLVDEGKLDLDASVNTYLPGLLPDDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFY--VHPDTVIPGTHANGYLTPDEAGGALVDSTEQTVSWAQSAG----AVISSTQDLDTFFSALM---SGQLMSAA--QLAQMQQWTTVNSTQGYGLGLRRRDLSCGISVYGHTGTVQGYYTYAFASKDGKR--SVTALAN-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129461 for 1963 contacts (-66.0/contact) +
2D Compatibility (PS) -25575 + (NN) -13627 + (LL) 5944
1D Compatibility (HY) -17600 + (ID) 4050
Total energy: -184369.0 ( -93.92 by residue)
QMean score : 0.453
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