Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKRQTKFCKESLVIKTSRVFPSDTNNHNTLFGGRLMTYIDDTASISASRHCRTEIVTASTDSVDFLKPIKNDHSVCLESYVASTGRSSMEIFVKIIAENLKTGERYLAATSFLTFVALGADGKTVEVPLVEPETEEQKRIHAGAEARSIARKIRLKENQSLAESLSTDIPW
3SPS Chain:A ((3-153))
----QSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKR-----------------
General information:
TITO was launched using:
RESULT:
Template:
3SPS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62663 for 1160 contacts (-54.0/contact) +
2D Compatibility (PS) -16894 + (NN) -4739 + (LL) 1572
1D Compatibility (HY) -8400 + (ID) 3450
Total energy: -94574.0 ( -81.53 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_3SPS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SPS-query.scw
PDB file :
Tito_Scwrl_3SPS.pdb
: