Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYQVVKMFGDWEPWWFIEGWEEDITEIAEYDTLSEALLYFQEEWDRGQEKWPYFQSKSSLLATFWSIKEKRWCEECDEYLQQYHSLMLLKEWQEIP-----KEESIERFEVFNKIAELPSACSLNL |
1Y2U Chain:A ((38-117)) | ---------------------------------GEYVLTMGGSGTSGSLRFVSSDTDESFVATFGVHNYKRWCDIVTNLTNEQTALVINQEYYGVPIRDQARENQLTSYNVANAKGRRFAIEYTVT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Y2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2623 for 433 contacts (6.1/contact) +
2D Compatibility (PS) -7503 + (NN) 2176 + (LL) 3004
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -4150.0 ( -9.58 by residue)
QMean score : -0.002
|
|
|