Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQSLAKQVIHQAVEVNAQDIYIIPKGDCYELYMRIDDERRFIDVFEFNRMAS--LISHFKFVAGMNVGEKRRSQLGSCDYELSEGRLVSLRLSSVGDYRGQESLVIRILYSGHQDL--------KYWFDNIKQMKEVLGTRGLYLFSGPVGSGKTTLMYQLASEVFKN-KQIITIEDPVEIKNDKMLQLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSISGVYDRLIELGVNYQELENSLKLIAYQRLIGGGSLIDFETGNFKKHSSDKWNRQVDILAEEGHISKKQAQVEKIIPQETTESSPTF |
| 4KSS Chain:A ((28-295)) | ----LINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLR--EVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISL------AVDVRVSTMPSSHG-ERVVMRLLDK-----DLHSLGMTAHNHDNFRRL--IKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLFEPLILYRATGCPKCNHKGYRGRTGIHELLLVDDAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KSS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175804 for 1857 contacts (-94.7/contact) +
2D Compatibility (PS) -26326 + (NN) -7981 + (LL) 1492
1D Compatibility (HY) -16400 + (ID) 4150
Total energy: -229169.0 ( -123.41 by residue)
QMean score : 0.548
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