Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLLLKCKDKKVKAFTLLEMLVVLIIISVLLLLFVPNLSKQKESVTRTGNAAVVKVVESQAELFELQETGRKA--SLSTLKSGGYITEKQEKAYLDYYKDSSNGSQKISS
2AEU Chain:A ((22-64))
------------------------------------------------------------------LNEKGRDALYDLSGL-SGGFLIDEKDKALLNTYIGSSYFAEKVNE
General information:
TITO was launched using:
RESULT:
Template:
2AEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7852 for 151 contacts (52.0/contact) +
2D Compatibility (PS) -4075 + (NN) 2570 + (LL) 7180
1D Compatibility (HY) -3200 + (ID) 900
Total energy: 9427.0 ( 62.43 by residue)
QMean score : 0.149
(partial model without unconserved sides chains):
PDB file :
Tito_2AEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AEU-query.scw
PDB file :
Tito_Scwrl_2AEU.pdb
: