Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRCSTKEMRLVYRDFLLQANQENKQITVLEADLSSSMSTNVLASEFGKRYINLGIMEAEMVGLAAGLAIKGYK-PYLHTFGPFASRRVFDQVFLSLGYSQLSATIIGSDAGVSAEMNGGTHMPFEELGLLRLIPKATIFEVSDDIQFEAILKQTLSIDGLKYIRTIRKAPTAVYEGCEDFSKGFIQ-LRQGKD--IALVASGIMVSRAIEAADYLKELGIEASVIDLFKIKPLPEELKPLLIDQS------IVTIENHNRIGGIGSALCEWLSMEKDTTVSRMGIDERFGQVGQMKYLLEEYGLAVKDIVEHCKSIYKS |
4KXU Chain:A ((318-607)) | --------RKAYGQALAKLGHASDRIIALDGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTR-AFDQIRMA-AISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRK---LILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVN-RVPRSGKPAELLKMFGIDRDAIAQAVRGLIT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178454 for 2514 contacts (-71.0/contact) +
2D Compatibility (PS) -30469 + (NN) -11109 + (LL) 1388
1D Compatibility (HY) -15200 + (ID) 4350
Total energy: -238194.0 ( -94.75 by residue)
QMean score : 0.482
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