Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSTNELDIRLRAFINAPDNFLDSIGLVNALHHSTVWASKEPYAIQVDGQEVVPVFTDITDLNHFKEEQESARDMFWESRRSLDV-LDEAISHGLSGLVYNLKKEGDFGNSTIFYCEDMVQFMNNYTTILNQLLNEDNIVADIMDKTYLVPAFVHPREEGSFDRFFPTMSTPEGKSYVPVFSNLLSFEKWYNHNDFGGAFRKAQGVILAWTIDDIYKPRNGENEIDDTFGVAINPFDEQQVLVDWSDVEND |
| 1QVS Chain:A ((1-78)) | ---------------------------------------------------------DITVYNGQAKEAATAVAKAFEQETGIKVTLNSGKSEQLAG---QLKEEGDKTPADVFYTEQTATFAD---------LSEAGLLAPISEQTIQQTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYVSTSGAFLEQVVALSKMKGDKVALNWLKGLKENGKLYAKNSVALQAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2258 for 469 contacts (-4.8/contact) +
2D Compatibility (PS) -8310 + (NN) -3973 + (LL) 5204
1D Compatibility (HY) -2400 + (ID) 1300
Total energy: -13037.0 ( -27.80 by residue)
QMean score : 0.175
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