Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKTKFSDPLEQLAKKRKRKTLFKTVVLALITVLLVVGIAFKGFTYLTSKNGQKTYHNFELLSEIAYPNISYDSLYYQPSGQFTGKVHADRFKDIDGVQIPYSSFEENYSISGTFGTNADEKSEKNGLYDRGTRQKVPQFFNKNVKYKKGEAKTTPTNDLKYVNKLNNDLIEIAITFDKSYSYKEIKTMIPNNIKQNWLWIGTSTELDTSYWPTKYQFGTDPETLNTPQIFIDKIKENLKGNSKVYFNNINIYSDLEKYAKKYDKVNNSDKLKFSGIILTGKAENFKQLKEKEWVHASSIGANIEYKPYYKLDKE |
4Q6N Chain:A ((299-371)) | ---------------------------------------------------------------------------------------------------------------------------------------KIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDP--SLEEVKMQIDN--KDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15163 for 339 contacts (44.7/contact) +
2D Compatibility (PS) -7415 + (NN) 804 + (LL) 9636
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: 11688.0 ( 34.48 by residue)
QMean score : -0.007
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