Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKYIKADRFFYADHVKENGYLEIKDNHFGKWIENISGQEEILDYSGYQIAPGLVDTHIHGFAGADVMDCDSEGILRMSAGLLSTGVTSFLPTTLTSDTKRLEEASKSVAAVAGKEQGAKIQGIYFEGPYFTEEYKGAQNPIYMRNPNLEEFAQWQKAAKGLITKIALAPEREGVEEFVSAITKQGVTVALGHSNGTYKEAKKAVKAGASVWVHAYNGMRGLTHREPGMVGAVYNLPNTYAELICDGHHVDPVACDILMTQKGHNHVALITDCMAAGGAPDGDYMLGELPVVVSNGTARLKDGGNLAGSILKLKDGLKNVVEWGIATPEEAVRMASYVPAVSVGIDNVCGQIKEGYAADFIVLDKHLDLVATYLDGEKRWQS |
| 1O12 Chain:A ((53-375)) | -------------------------------------------------LMPGFVDPHIHGVVGADTMNCD---FSEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYILENPSTSLLGVHLEGPYISKEKKGAHSEKHIRPPSERELSEIDSPAKML----TFAPEIES-SELLLRLVKRDIVLSAGHSIATFEEFMKFYKEGVKRITHFPNGLKPLHHREIGITGAGLLLDDVKLELICDGVHLSREMVKLVYKVKKANGIVLVTDSISAAGLKDGTTTLGDLVVKVKDGVPRLED-GTLAGSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVELGLDDR-GRIAEGTRADLVLLDEDLNVVMTIKEGEVVFRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177295 for 2962 contacts (-59.9/contact) +
2D Compatibility (PS) -34928 + (NN) -14934 + (LL) 3608
1D Compatibility (HY) -20000 + (ID) 5900
Total energy: -249449.0 ( -84.22 by residue)
QMean score : 0.487
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