Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRHFETTRRIVIKVGTSSLVQTSGKINLSKIDHLAFVISSLMNRGMEVILVSSGAMGFGLDILKMDKRPQEISQQQAVSSVGQVAMMSLYSQIFSHYQTHVSQILLTRDVVVFPESLQNVTNSFESLLSMGILPIVNENDAVSVDEMDHKTKFGDNDRLSAVVAKITKADLLIMLSDIDGLFDKNPNIYDDAVLRSHVSEITDDIIKSAGGAGSKFGTGGMLSKIKSAQMVFDNNGQMILMNGANPRDILKVLDGHNIGTYFAQGK |
2J5T Chain:H ((7-255)) | ----------LVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAEI----KVGDNDNLSALAAILAGADKLLLLTDQKGLY----------ELIKDVYGID------------------MSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171937 for 1837 contacts (-93.6/contact) +
2D Compatibility (PS) -23676 + (NN) -9476 + (LL) 784
1D Compatibility (HY) -16800 + (ID) 3950
Total energy: -225055.0 ( -122.51 by residue)
QMean score : 0.467
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