Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLSIMAGVIAFVLTVIAIPRFIKFYQLKKIGGQQMHEDVKQHLAKAGTPTMGGTVFLIVALLVSLIFSIILSKENSGNLGATFGILSVVLIYGIIGFLDDFLKIFKQINEGL-----TPKQKMSLQLIAGLIFYFVHVLPSGTSAINIF----GFYLEVGYLYAFFVLFWVVGFSNAV----------NLTDGIDGLASISVVISLITYGIIAYNQTQFDILLIIVIMIGALLGFFVFNHKPAKVFMGDVGSLALGAMLAAISIALRQEWTLLFIGFVYVFETSSVMLQVAYFKYTKKKTGVGKRIFRMTPFHHHLELGGVSGKGNKWSEWKVDAFLWAIGIFMSAITLAILYL |
| 2EWV Chain:A ((33-231)) | ----------------------------------------------------------------------------------TAGAPPAVRIDGYIKFLKDFPRLTPEDTQKLAYSVMSEKHRQKLEENGQVDFSF-GVRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDY----INQTKSYHIITIEDPIE-----YVFKHKKSIVNQREVGE-DTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189136 for 1166 contacts (-162.2/contact) +
2D Compatibility (PS) -18705 + (NN) 1744 + (LL) 8508
1D Compatibility (HY) -400 + (ID) 2600
Total energy: -200589.0 ( -172.03 by residue)
QMean score : 0.093
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