Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASIIYSPKDIFEQDFKVSMRGYDKKEVDVFLDDVIKDYENYLEQIEKLQMENRRLQQALDKKESEASNVRNSGTAMYNQKPIAQSATNFDILKRISRLEKEVFGRQIRE
2WUJ Chain:A ((4-47))
------TPNDIHNKTFTKSFRGYDEDEVNEFLAQVRKDYEIVLRKKTELEAKVNE-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3687 for 198 contacts (-18.6/contact) +
2D Compatibility (PS) -4613 + (NN) -1406 + (LL) 4764
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -8742.0 ( -44.15 by residue)
QMean score : 0.457
(partial model without unconserved sides chains):
PDB file :
Tito_2WUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WUJ-query.scw
PDB file :
Tito_Scwrl_2WUJ.pdb
: