Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEKRNYDKVQKELSELNHISHQSMSEVRQIVSNLKYRTVVEEIDELYRLFQLSNIKLTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAEADSVELSLVRQGATINIEMIDNGC--GFTNLDGDEFHSIQERLTIVEGTLTILSRSKPTHIQVVLKEV
3GIF Chain:A ((14-201))----------------------------------------------------------------------------------------------------------------------------------------------------------------DANERIAELVKLEERQRIARDLEDTLGQKLSLIGLKSDLARKLIYK-DPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGE-----HGLLGMRERLEFANGSLHIDTENGTKLTMAIPNN-


General information:
TITO was launched using:
RESULT:

Template: 3GIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47043 for 1096 contacts (-42.9/contact) +
2D Compatibility (PS) -19132 + (NN) -4265 + (LL) 15084
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -69556.0 ( -63.46 by residue)
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_3GIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GIF-query.scw
PDB file : Tito_Scwrl_3GIF.pdb: