Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHHYFLAFFYGSVIIFAICFVIIDSLGVNLVHLYQTSRLWLIEQLIFSIFFLSLAVTILLLLTWFLLDDNSKRQINHNLRRILNNQSINVTDDGTEISTNIQRLSKKMNLMTASLQSKENSRILKSQEIVK-QERKRIARDLHDTVSQDLFAASMVLSGIAQNVSQLDVDQVGSQLLAVEEMLQHAQNDLRILLLHLRPVELENKTLSEGFKMILKELTDKSDIEVVYHESILTLPKKIE---DNIFRIG-QEFISNTLKHSQASRLEVYLNQTENELQLKMIDNGIGFDMDSVYDLSYGLKNIEDRVEDLAGNLQLLSQPDKGVAMDIRLPLVNQNEDKNG |
| 3GIG Chain:A ((16-214)) | -------------------------------------------------------------------------------------------------------------------------NERI---AELVKLEERQRIARDLHDTLGQKLSLIGLK-SDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELIN------IKQILEAADIMFIYEEE--KWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEENSFS--HGLLGMRERLEFANGSLHI--DTENGTKLTMAIPNN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33732 for 1233 contacts (-27.4/contact) +
2D Compatibility (PS) -20526 + (NN) -8613 + (LL) 13116
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -63405.0 ( -51.42 by residue)
QMean score : 0.397
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