Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLENIISLVSQYQKIDVNTLSELLQVSKVTIRKDLDKLEGKGLLHREHGYAVLNSGDDLNVR-LSFNHK---TKKEIAALAANMVSDNDTILIESGSTCALLAENICQT-----KRNVTILTNSCFIANYLREYDSCQIVLLGGEYQSSSQVTVGPLLKKMISLFHVSLAFVGTDGFDPKLGFMGRDLMRSEVAQEMANAADEVIILTDSSKFNQTALVEQLPLSTVSQVITDKHPNSEIANLFQEAEITIQSLLQVP |
| 1VB5 Chain:A ((74-186)) | -----------------------------------------------------VTNRRDILKSRALEFLRRMEEAKRELASIGAQLIDDGDVIITHSFSSTVL---EIIRTAKERKKRFKVILTESS--PDYEGLHLARELEFSGIEFEVITDAQMGLFCRE------ASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYKFHPTLKSGDVMLMERDLIRGNVRIRNVLFDVTPWKYVRGIITELGIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28562 for 658 contacts (-43.4/contact) +
2D Compatibility (PS) -11023 + (NN) -4103 + (LL) 5692
1D Compatibility (HY) -4800 + (ID) 1700
Total energy: -44496.0 ( -67.62 by residue)
QMean score : 0.309
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