Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYDQINSYLVDIFNRIMIIEEMSLKTSQFSDVSLKEMHTIEIIGKHSEVTPSDVARELMLTLGTVTTSLNKLEKKGYIERKRSSIDRRVVHLSLTKRGRLLDRLHSKFHKSMVSHIIEDLGEEDIKMLTSALGNLHKFLEDLV
1Z9C Chain:A ((48-139))
------------------------------------------LLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDERSVLISLTEDGALLKEKAVDIPGTILG--LSKQSGEDLKQLKSALYTLLETLHQ--
General information:
TITO was launched using:
RESULT:
Template:
1Z9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20199 for 516 contacts (-39.1/contact) +
2D Compatibility (PS) -9531 + (NN) -2626 + (LL) 4380
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: -37176.0 ( -72.05 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_1Z9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z9C-query.scw
PDB file :
Tito_Scwrl_1Z9C.pdb
: