Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADISIISMILVVIVAFFAGLEGILDQFQIHQPLVACTLIGLVTGHLEAGIILGGSLQMIALAWANIGAAVAPDAALASVAAAIILVKSGDFTQKGINFAFSTAVPLAIAGLFLTMIVRTISTALVHAGDKAASEGNFAAIERFHFIALLLQGLRIAFPAALLLAIPSSSVQSILEAMPDWLNGGMQVGGAMVVAVGYAMVINMMATREVWPFFALGF---ALAALNQLTLIAMGTIGVAIALIYISLSKMGGSKGTSNAGSNDPIGDILEDY |
4BEV Chain:A ((131-159)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WPFFKRGWQSLKTGQLNMFTLIAMG-IGVA--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -13346 for 121 contacts (-110.3/contact) +
2D Compatibility (PS) -2714 + (NN) 138 + (LL) 20576
1D Compatibility (HY) -3600 + (ID) 850
Total energy: 204.0 ( 1.69 by residue)
QMean score : 0.150
|
|
|