Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKIIAVDLDGTLLHNNNTISDYTADTLRKVQAQGHKVIITTGRPYRMALAHYLRLDLKTPMINFNGALTHIPEKKWAFERSATIDKKLLLETLNLSDAIQADFIASEYRKNFYITMDNRDKI-NPQLFGVNEITDKMALDVTKITRNPNALLMQTRHKDKYELAKELRQHFNHELEVDSWGGPL---NIL--------------------------------EFSPKGVNKAYALKHLLKSLNLSQENLIAFGDEHNDTEMLAFAHTGYAMKNANPTLLPYADQQIQWTNEEDGVAKTLEKLLL |
| 1NRW Chain:A ((5-288)) | ---KLIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGR--LYHHETIDKKRAYDILS--------WLESE---NYYYEVFTGSAIYTPQ--NGRELLD-VELDRFR-SANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIAD-AVTLTNDEHGVAHMMKHLL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NRW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55881 for 2112 contacts (-26.5/contact) +
2D Compatibility (PS) -27052 + (NN) -12323 + (LL) 2360
1D Compatibility (HY) -14000 + (ID) 4500
Total energy: -111396.0 ( -52.74 by residue)
QMean score : 0.374
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